Publication Listing for the MeSH term prediction. Found 18 abstracts

Mavaddat N, Michailidou K, Dennis J, Lush M, Fachal L, Lee A, Tyrer JP, Chen TH, Wang Q, Bolla MK, Yang X, Adank MA, Ahearn T, Aittomaki K, Allen J, Andrulis IL, Anton-Culver H, Antonenkova NN, Arndt V, Aronson KJ, Auer PL, Auvinen P, Barrdahl M, Freeman LE, Beckmann MW, Behrens S, Benitez J, Bermisheva M, Bernstein L, Blomqvist C, Bogdanova NV, Bojesen SE, Bonanni B, Borresen-Dale AL, Brauch H, Bremer M, Brenner H, Brentnall A, Brock IW, Brooks-Wilson A, Brucker SY, Bruning T, Burwinkel B, Campa D, Carter BD, Castelao JE, Chanock SJ, Chlebowski R, Christiansen H, Clarke CL, Collee JM, Cordina-Duverger E, Cornelissen S, Couch FJ, Cox A, Cross SS, Czene K, Daly MB, Devilee P, Dork T, dos-Santos-Silva I, Dumont M, Durcan L, Dwek M, Eccles DM, Ekici AB, Eliassen AH, Ellberg C, Engel C, Eriksson M, Evans DG, Fasching PA, Figueroa J, Fletcher O, Flyger H, Forsti A, Fritschi L, Gabrielson M, Gago-Dominguez M, Gapstur SM, Garcia-Saenz JA, Gaudet MM, Georgoulias V, Giles GG, Gilyazova IR, Glendon G, Goldberg MS, Goldgar DE, Gonzalez-Neira A, Alnaes GI, Grip M, Gronwald J, Grundy A, Guenel P, Haeberle L, Hahnen E, Haiman CA, Hakansson N, Hamann U, Hankinson SE, Harkness EF, Hart SN, He W, Hein A, Heyworth J, Hillemanns P, Hollestelle A, Hooning MJ, Hoover RN, Hopper JL, Howell A, Huang GM, Humphreys K, Hunter DJ, Jakimovska M, Jakubowska A, Janni W, John EM, Johnson N, Jones ME, Jukkola-Vuorinen A, Jung A, Kaaks R, Kaczmarek K, Kataja V, Keeman R, Kerin MJ, Khusnutdinova E, Kiiski JI, Knight JA, Ko YD, Kosma VM, Koutros S, Kristensen VN, Kruger U, Kuhl T, Lambrechts D, Le Marchand L, Lee E, Lejbkowicz F, Lilyquist J, Lindblom A, Lindstrom S, Lissowska J, Lo WY, Loibl S, Long JR, Lubinski J, Lux MP, MacInnis RJ, Maishman T, Makalic E, Kostovska IM, Mannermaa A, Manoukian S, Margolin S, Martens JW, Martinez ME, Mavroudis D, McLean C, Meindl A, Menon U, Middha P, Miller N, Moreno F, Mulligan AM, Mulot C, Munoz-Garzon VM, Neuhausen SL, Nevanlinna H, Neven P, Newman WG, Nielsen SF, Nordestgaard BG, Norman A, Offit K, Olson JE, Olsson H, Orr N, Pankratz VS, Park-Simon TW, Perez JI, Perez-Barrios C, Peterlongo P, Peto J, Pinchev M, Plaseska-Karanfilska D, Polley EC, Prentice R, Presneau N, Prokofyeva D, Purrington K, Pylkas K, Rack B, Radice P, Rau-Murthy R, Rennert G, Rennert HS, Rhenius V, Robson M, Romero A, Ruddy KJ, Ruebner M, Saloustros E, Sandler DP, Sawyer EJ, Schmidt DF, Schmutzler RK, Schneeweiss A, Schoemaker MJ, Schumacher F, Schurmann P, Schwentner L, Scott C, Scott RJ, Seynaeve C, Shah M, Sherman ME, Shrubsole MJ, Shu XO, Slager S, Smeets A, Sohn C, Soucy P, Southey MC, Spinelli JJ, Stegmaier C, Stone J, Swerdlow AJ, Tamimi RM, Tapper WJ, Taylor JA, Terry MB, Thone K, Tollenaar R, Tomlinson I, Truong T, Tzardi M, Ulmer HU, Untch M, Vachon CM, van Veen EM, Vijai J, Weinberg CR, Wendt C, Whittemore AS, Wildiers H, Willett W, Winqvist R, Wolk A, Yang XH, Yannoukakos D, Zhang Y, Zheng W, Ziogas A, Clarke C, Balleine R, Baxter R, Braye S, Carpenter J, Dahlstrom J, Forbes J, Lee CS, Marsh D, Morey A, Pathmanathan N, Scott R, Simpson P, Spigelman A, Wilcken N, Yip D, Zeps N, Sexton A, Dobrovic A, Christian A, Trainer A, Fellows A, Shelling A, De Fazio A, Blackburn A, Crook A, Meiser B, Patterson B, Clarke C, Saunders C, Hunt C, Scott C, Amor D, Ortega DG, Marsh D, Edkins E, Salisbury E, Haan E, Macrea F, Farshid G, Lindeman G, Trench G, Mann G, Giles G, Gill G, Thorne H, Campbell I, Hickie I, Caldon L, Winship I, Cui J, Flanagan J, Kollias J, Visvader J, Taylor J, Burke J, Saunus J, Forbs J, Hopper J, Beesley J, Kirk J, French J, Tucker K, Wu K, Phillips K, Forrest L, Lipton L, Andrews L, Lobb L, Walker L, Kentwell M, Spurdle M, Cummings M, Gleeson M, Harris M, Jenkins M, Young MA, Delatycki M, Wallis M, Burgess M, Brown M, Southey M, Bogwitz M, Field M, Friedlander M, Gattas M, Saleh M, Aghmesheh M, Hayward N, Pachter N, Cohen P, Duijf P, James P, Simpson P, Fong P, Butow P, Williams R, Kefford R, Simard J, Balleine RM, Dawson SJ, Lok S, O'Connell S, Greening S, Nightingale S, Edwards S, Fox S, McLachlan SA, Lakhani S, Dudding T, Antill Y, Sahlberg KK, Ottestad L, Karesen R, Schlichting E, Holmen MM, Sauer T, Haakensen V, Engebraten O, Naume B, Fossa A, Kiserud CE, Reinertsen KV, Helland A, Riis M, Geisler J, Dunning AM, Thompson DJ, Chenevix-Trench G, Chang-Claude J, Schmidt MK, Hall P, Milne RL, Pharoah PD, Antoniou AC, Chatterjee N, Kraft P, Garcia-Closas M, Easton DF, Abctb Investigators, kConFab AI, Nbcs Collaborators. Polygenic Risk Scores for Prediction of Breast Cancer and Breast Cancer Subtypes. American journal of human genetics. 2019 Jan;104(1):21-34.   PMCID: PMC6323553

Beglov D, Hall DR, Brenke R, Shapovalov MV, Dunbrack RL, Kozakov D, Vajda S. Minimal ensembles of side chain conformers for modeling protein-protein interactions. Proteins-Structure Function and Bioinformatics. 2012 Feb;80(2):591-601.   PMCID: PMC3297704

Mavaddat N, Barrowdale D, Andrulis IL, Domchek SM, Eccles D, Nevanlinna H, Ramus SJ, Spurdle A, Robson M, Sherman M, Mulligan AM, Couch FJ, Engel C, McGuffog L, Healey S, Sinilnikova OM, Southey MC, Terry MB, Goldgar D, O'Malley F, John EM, Janavicius R, Tihomirova L, Hansen TV, Nielsen FC, Osorio A, Stavropoulou A, Benitez J, Manoukian S, Peissel B, Barile M, Volorio S, Pasini B, Dolcetti R, Putignano AL, Ottini L, Radice P, Hamann U, Rashid MU, Hogervorst FB, Kriege M, van der Luijt RB, Peock S, Frost D, Evans DG, Brewer C, Walker L, Rogers MT, Side LE, Houghton C, Weaver J, Godwin AK, Schmutzler RK, Wappenschmidt B, Meindl A, Kast K, Arnold N, Niederacher D, Sutter C, Deissler H, Gadzicki D, Preisler-Adams S, Varon-Mateeva R, Schonbuchner I, Gevensleben H, Stoppa-Lyonnet D, Belotti M, Barjhoux L, Isaacs C, Peshkin BN, Caldes T, de la Hoya M, Canadas C, Heikkinen T, Heikkila P, Aittomaki K, Blanco I, Lazaro C, Brunet J, Agnarsson BA, Arason A, Barkardottir RB, Dumont M, Simard J, Montagna M, Agata S, D'Andrea E, Yan M, Fox S, Rebbeck TR, Rubinstein W, Tung N, Garber JE, Wang XS, Fredericksen Z, Pankratz VS, Lindor NM, Szabo C, Offit K, Sakr R, Gaudet MM, Singer CF, Tea MK, Rappaport C, Mai PL, Greene MH, Sokolenko A, Imyanitov E, Toland AE, Senter L, Sweet K, Thomassen M, Gerdes AM, Kruse T, Caligo M, Aretini P, Rantala J, von Wachenfeld A, Henriksson K, Steele L, Neuhausen SL, Nussbaum R, Beattie M, Odunsi K, Sucheston L, Gayther SA, Nathanson K, Gross J, Walsh C, Karlan B, Chenevix-Trench G, Easton DF, Antoniou AC. Pathology of Breast and Ovarian Cancers among BRCA1 and BRCA2 Mutation Carriers: Results from the Consortium of Investigators of Modifiers of BRCA1/2 (CIMBA). Cancer Epidemiology Biomarkers & Prevention. 2012 Jan;21(1):134-47.   PMCID: PMC3272407

Goldgar DE, Healey S, Dowty JG, Da Silva L, Chen XQ, Spurdle AB, Terry MB, Daly MJ, Buys SM, Southey MC, Andrulis I, John EM, Khanna KK, Hopper JL, Oefner PJ, Lakhani S, Chenevix-Trench G. Rare variants in the ATM gene and risk of breast cancer. Breast Cancer Research. 2011 Jan;13(4):R73.   PMCID: PMC3236337

Hamilton CA, Miller A, Miller C, Krivak TC, Farley JH, Chernofsky MR, Stany MP, Rose GS, Markman M, Ozols RF, Armstrong DK, Maxwell GL. The impact of disease distribution on survival in patients with stage III epithelial ovarian cancer cytoreduced to microscopic residual: A gynecologic oncology group study. Gynecologic Oncology. 2011 Sep;122(3):521-6.   PMCID: *

Swaby RF, Cristofanilli M. Circulating tumor cells in breast cancer: A tool whose time has come of age. BMC Medicine. 2011 Apr;9:43.   PMCID: PMC3107794

Xu QF, Dunbrack RL. The protein common interface database (ProtCID)-a comprehensive database of interactions of homologous proteins in multiple crystal forms. Nucleic acids research. 2011 Jan;39:D761-D770.   PMCID: PMC3013667

Doulias PT, Greene JL, Greco TM, Tenopoulou M, Seeholzer SH, Dunbrack RL, Ischiropoulos H. Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation. Proceedings of the National Academy of Sciences of the United States of America. 2010 Sep;107(39):16958-63.   PMCID: PMC2947911 [Available on 2011/3/28]

Plotnikova OV, Pugacheva EN, Dunbrack RL, Golemis EA. Rapid calcium-dependent activation of Aurora-A kinase - art. no. 64. Nature Communications. 2010 Sep;1:64.   PMCID: PMC2963827

Randall LM, Monk BJ, Moon J, Parker R, Al-Ghazi M, Wilczynski S, Fruehauf JP, Markman M, Burger RA. Prospective evaluation of an in vitro radiation resistance assay in locally advanced cancer of the uterine cervix: A Southwest Oncology Group Study. Gynecologic Oncology. 2010 Dec;119(3):417-21.   PMCID: PMCID: PMC2978536 [Available on 2011/12/1]

Azizi AA, Gelpi E, Yang JW, Rupp B, Godwin AK, Slater C, Slavc I, Lubec G. Mass spectrometric identification of serine hydrolase OVCA2 in the medulloblastoma cell line DAOY. Cancer letters. 2006 Sep;241(2):235-49.

Canutescu AA, Dunbrack RL. MoIlDE: a homology modeling framework you can click with. Bioinformatics (Oxford, England). 2005 Jun 15;21(12):2914-6.

Ochs MF, Moloshok TD, Bidaut G, Toby G. Bayesian decomposition - Analyzing microarray data within a biological context. ANNALS OF THE NEW YORK ACADEMY OF SCIENCES. 2004 Jan;1020:212-26.

Dunbrack RL. Rotamer libraries in the 21(st) century. Current opinion in structural biology. 2002 Aug;12(4):431-40.

Fiveash JB, Hanks G, Roach M, Wang SB, Vigneault E, McLaughlin PW, Sandler HM. 3D conformal radiation therapy (3DCRT) for high grade prostate cancer: A multi-institutional review. International Journal of Radiation Oncology Biology Physics. 2000 May;47(2):335-42.

Dunbrack RL. Comparative modeling of CASP3 targets using PSI-BLAST and SCWRL. Proteins-Structure Function and Genetics. 1999 Jan;:81-7.

Rebbeck TR, Jordan HA, Schnur RE, Rogatko A. Utility of linked markers in genetic counseling: Estimation of carrier risks in X-linked ocular albinism. American Journal of Medical Genetics. 1997 May 02;70(1):58-66.

Odwyer PJ, Hudes GR, Walczak J, Schilder R, Lacreta F, Rogers B, Cohen I, Kowal C, Whitfield L, Boyd RA. Phase-I and Pharmacokinetic Study of the Novel Platinum Analog Ci-973 on a 5-Daily Dose Schedule. Cancer Research. 1992 Dec 15;52(24):6746-53.

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prediction carcinoma identification cancer risk sequence chemotherapy progression ovarian-cancer radiotherapy proteomics cisplatin carboplatin proteins comparative modeling profiles hot-spots dose flexibility backbone irradiation early-onset in-vivo plasma prostate neoplasms recognition cysteine germline modification mutations medulloblastoma structure saccharomyces-cerevisiae gene-expression flexible ligand docking family registry conformational selection concurrent chemotherapy aggressive surgery protein structures Microscopic residual side chain flexibility obese gene S-nitrosation prognosis genetic 2006 i ds-v24-p2396 sites families dependent rotamer library pelvic irradiation statistical-analysis folding funnels information dead-end elimination missense mutations dose-escalation subcellular-localization immunohistochemical markers escalation protein hef1 deletion intraperitoneal cisplatin susceptibility database estrogen-receptor status metabolism protein binding state classification kinetics stratification Oncology adenocarcinoma protein information creatinine clearance hydrogen-bonds epidemiology pre existing ensemble of conformers cell-cycle mitotic spindle blood SCWRL thioredoxin ob mice homology modeling mass-spectrometry hydroxyurea In vitro assay impaired renal-function Bayesian statistics positron-emission-tomography OVCA2 centrosome amplification server system preferences cancer-cells women tumor subtypes features three-dimensional conformal therapy risk prediction ataxia-telangiectasia tool screening prostate specific antigen binding therapy Chemoradiation cdna microarrays immunohistochemistry brca1 vasopressin receptors allelic loss Cervical cancer residues survival cell-death localization rotamer libraries radical prostatectomy structural classification genetic susceptibility prognostic-factors paclitaxel potentials quaternary structure serine-protease neoadjuvant Radiation resistance expression focal adhesion kinase molecular docking critique ligand-binding phenotype breast alignment performance PSI-BLAST nitric-oxide synthase cysteine modification polygenic linkage analysis structure alignment tumor-suppressor discovery design side-chain conformations