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Publication Listing for the MeSH term Sequence Alignment. Found 28 abstracts

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Haldane A, Levy RM. Influence of multiple-sequence-alignment depth on Potts statistical models of protein covariation. Physical review E. 2019 Mar;99(3-1):032405.   PMCID: PMC6508952
Patel R, Kumar S. On estimating evolutionary probabilities of population variants. BMC evolutionary biology. 2019 Jun 25;19(1):133.   PMCID: PMC6593550
Paudyal S, Alfonso-Prieto M, Carnevale V, Redhu SK, Klein ML, Nicholson AW. Combined computational and experimental analysis of a complex of ribonuclease III and the regulatory macrodomain protein, YmdB. Proteins. 2015 Mar;83(3):459-72.   PMCID: PMC4329070
Tanaka N, Delemotte L, Klein ML, Komaromy AM, Tanaka JC. A cyclic nucleotide-gated channel mutation associated with canine daylight blindness provides insight into a role for the S2 segment tri-Asp motif in channel biogenesis. PLoS One. 2014 Jan;9(2):e88768.   PMCID: Pmc3931646
Makhov P, Golovine K, Uzzo RG, Wuestefeld T, Scoll BJ, Kolenko VM. Transcriptional regulation of the major zinc uptake protein hZip1 in prostate cancer cells. Gene. 2009 Feb 15;431(1-2):39-46.   PMCID: PMC2741159
Gudima S, He Y, Chai N, Bruss V, Urban S, Mason W, Taylor J. Primary human hepatocytes are susceptible to infection by hepatitis delta virus assembled with envelope proteins of woodchuck hepatitis virus. J Virol. 2008 Aug;82(15):7276-83.   PMCID: PMC2493318
Zhang R, Chen W, Adams PD. Molecular dissection of formation of senescence-associated heterochromatin foci. Mol Cell Biol. 2007 Mar;27(6):2343-58.
Dunbrack RL. Sequence comparison and protein structure prediction. Current opinion in structural biology. 2006 Jun;16(3):374-84.
Manne SL, Ostroff JS, Winkel G, Fox K, Grana G, Miller E, Ross S, Frazier T, Buyyounouski MK, Hanlon AL, Eisenberg DF, Horwitz EM, Feigenberg SJ, Uzzo RG, Pollack A, Morrow M, Chen JQ, Yager JD, Russo J, Bassi DE, Fu J, Lopez de Cicco R, Klein-Szanto AJ, Devlin J, Sherman E, Altomare DA, Vaslet CA, Skele KL, De Rienzo A, Devarajan K, Jhanwar SC, McClatchey AI, Kane AB, Testa JR, Murphy ME, Langer CJ, Mehta MP, Viterbo R, Greenberg RE, Al-Saleem T, Canutescu AA, Dunbrack RL, Serebriiskii IG, Fang R, Latypova E, Hopkins R, Vinson C, Joung JK, Golemis EA. Couple-focused group intervention for women with early stage breast cancer. . J Consult Clin Psychol. 2005 Sep 15;73(4):634-46.
Wang G, Dunbrack RL. PISCES: recent improvements to a PDB sequence culling server. Nucleic acids research. 2005 Jul;33(Web Server issue):W94-8.
Bidaut G, Ochs MF. ClutrFree: cluster tree visualization and interpretation. Bioinformatics (Oxford, England). 2004 Nov;20(16):2869-71.
Einarson MB, Cukierman E, Compton DA, Golemis EA. Human enhancer of invasion-cluster, a coiled-coil protein required for passage through mitosis. Molecular and Cellular Biology. 2004 May;24(9):3957-71.
Daganzo SM, Erzberger JP, Lam WM, Skordalakes E, Zhang R, Franco AA, Brill SJ, Adams PD, Berger JM, Kaufman PD. Structure and function of the conserved core of histone deposition protein Asf1. Curr Biol. 2003 Dec 16;13(24):2148-58.
Toby GG, Gherraby W, Coleman TR, Golemis EA. A Novel RING Finger Protein, Human Enhancer of Invasion 10, Alters Mitotic Progression through Regulation of Cyclin B Levels. Mol Cell Biol. 2003 Mar;23(6):2109-22.
Park B, Nguyen NT, Dutt P, Merdek KD, Bashar M, Sterpetti P, Tosolini A, Testa JR, Toksoz D. Association of Lbc Rho guanine nucleotide exchange factor with alpha-catenin-related protein, alpha-catulin/CTNNAL1, supports serum response factor activation. The Journal of biological chemistry. 2002 Nov 22;277(47):45361-70.
Haas NB, Grabowski JM, North J, Moran JV, Kazazian HH, Burch JB. Subfamilies of CR1 non-LTR retrotransposons have different 5'UTR sequences but are otherwise conserved. Gene. 2001 Mar 07;265(1-2):175-83.
Matsumoto Y. Molecular mechanism of PCNA-dependent base excision repair. Prog Nucleic Acid Res Mol Biol. 2001 Jan;68:129-38.
Wang T, Arifoglu P, Ronai Z, Tew KD. Glutathione S-transferase P1-1 (GSTP1-1) inhibits c-Jun N-terminal kinase (JNK1) signaling through interaction with the C terminus. The Journal of biological chemistry. 2001 Jun 15;276(24):20999-1003.
Wang X, Babu JR, Harden JM, Jablonski SA, Gazi MH, Lingle WL, de Groen PC, Yen TJ, van Deursen JM. The mitotic checkpoint protein hBUB3 and the mRNA export factor hRAE1 interact with GLE2p-binding sequence (GLEBS)-containing proteins. The Journal of biological chemistry. 2001 Jul 13;276(28):26559-67.
Salicioni AM, Xi M, Vanderveer LA, Balsara B, Testa JR, Dunbrack RL, Godwin AK. Identification and structural analysis of human RBM8A and RBM8B: two highly conserved RNA-binding motif proteins that interact with OVCA1, a candidate tumor suppressor. Genomics. 2000 Oct;69(1):54-62.
The above publications are sorted by year, faculty last name, and first author. Click on any highlighted author listed to find all publications attributed to that individual. Click on the publication title to see the abstract. First authors who are faculty are highlighted like this. Last authors who are faculty are highlighted like this. Other authors who are faculty are highlighted like this.

MeSH cloud from publications including the MeSH term Sequence Alignment

Sequence Alignment Amino Acid Sequence Molecular Sequence Data metabolism genetics US Gov't Support-PHS chemistry Molecular Models Protein Binding Non-US Gov't Support Amino Acid Sequence Homology Protein Conformation Human Binding Sites Animal methods Software Amino Acid Motifs Saccharomyces cerevisiae Proteins DNA Sequence Analysis Comparative Study physiology Base Sequence Cell Cycle Proteins Mitosis Male Conserved Sequence Protein Sequence Analysis Cell Line Algorithms US Gov't Support-Non-PHS Mice Genetic Models Female Computational Biology Two-Hybrid System Techniques Recombinant Fusion Proteins Carrier Proteins Fluorescence In Situ Hybridization User-Computer Interface Protein Interaction Mapping Mutation Transfection Small Interfering RNA isolation & purification Neoplasm Proteins Molecular Cloning Histones 3T3 Cells Messenger RNA DNA-Binding Proteins Computer Simulation Antineoplastic Agents Computer Graphics Phosphorylation virology post-transcriptional regulation 0 (Plasmids) Zinc Fingers Retinal Cone Photoreceptor Cells Protein Folding Cation Transport Proteins Transcription Initiation Site Apoptosis Fluorescence Spectrometry 0 (Anticonvulsants) Retinal Degeneration Alleles Precipitin Tests Proto-Oncogene Proteins Zinc Molecular Dynamics Simulation antagonists & Complementary DNA Internet Chromosome Mapping Nuclear Proteins Molecular Docking Simulation Generalized method Endodeoxyribonucleases Metaphase Species Specificity Non-Histone Chromosomal Proteins Adult Mitotic Spindle Apparatus Proliferating Cell Nuclear Antigen Adrenal Gland Neoplasms Dog Diseases 0 (Proteins) Chromatography Serum Response Factor Middle Aged MAP Kinase Signaling System Energy Transfer surgery Genetic Variation 80 and over Aged Adrenal Cortex Hormones ADP-ribose Hepatitis Delta Virus Open Reading Frames Non-US Gov't Research Support DNA Primers DNA Repair COS Cells Seizures pathology Polyacrylamide Gel Electrophoresis EC 27137 (Proto-Oncogene Proteins c-raf) Oligonucleotide Array Sequence Analysis Cell Aging Hepatocytes Immunohistochemistry Kinetics veterinary Potential adaptation Viral Envelope Proteins Systems Integration Consensus Sequence Prostatic Neoplasms Escherichia coli Proteins US Gov't Research Support-PHS Molecular Evolution Phylogeny Macromolecular Systems G2 Phase Palliative Care growth & development therapy Protein Databases Cyclic Nucleotide-Gated Cation Channels etiology Gene Silencing Mitogen-Activated Protein Kinases Cyclin B Structure-Activity Relationship biosynthesis Treatment Outcome Oocytes Genetic Complementation Test macrodomain cytology Cultured Cells Protein Isoforms Isoenzymes Brain Neoplasms 0 (Recombinant Fusion Proteins) DNA Polymerase III Neoplastic Gene Expression Regulation
Last updated on Wednesday, August 12, 2020