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Publication Listing for the MeSH term Secondary Protein Structure. Found 20 abstracts

Coric P, Saribas AS, Abou-Gharbia M, Childers W, Condra JH, White MK, Safak M, Bouaziz S. Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein. Journal of cellular biochemistry. 2017 Oct;118(10):3268-80.   PMCID: PMC5550335
Haldane A, Flynn WF, He P, Vijayan RS, Levy RM. Structural propensities of kinase family proteins from a Potts model of residue co-variation. Protein science : a publication of the Protein Society. 2016 Aug;25(8):1378-84.   PMCID: PMC4972195
Modi V, Xu Q, Adhikari S, Dunbrack RL. Assessment of template-based modeling of protein structure in CASP11. Proteins. 2016 Sep;84 Suppl 1:200-20.   PMCID: PMC5030193
Wan H, Zhou G, Voelz VA. A Maximum-Caliber Approach to Predicting Perturbed Folding Kinetics Due to Mutations. J Chem Theory Comput. 2016 Dec 13;12(12):5768-76.
Honda RP, Xu M, Yamaguchi K, Roder H, Kuwata K. A Native-like Intermediate Serves as a Branching Point between the Folding and Aggregation Pathways of the Mouse Prion Protein. Structure (London, England : 1993). 2015 Sep;23(9):1735-42.   PMCID: 4640677
Selwood T, Tang L, Lawrence SH, Anokhina Y, Jaffe EK. Kinetics and thermodynamics of the interchange of the morpheein forms of human porphobilinogen synthase. Biochemistry. 2008 Mar 11;47(10):3245-57.
Srimathi T, Robbins SL, Dubas RL, Chang H, Cheng H, Roder H, Park YC. Mapping of POP1-binding site on pyrin domain of ASC. The Journal of biological chemistry. 2008 May 30;283(22):15390-8.
Xu Q, Canutescu AA, Wang G, Shapovalov M, Obradovic Z, Dunbrack RL. Statistical analysis of interface similarity in crystals of homologous proteins. J Mol Biol. 2008 Aug 29;381(2):487-507.   PMCID: PMC2573399
Bender GM, Lehmann A, Zou H, Cheng H, Fry HC, Engel D, Therien MJ, Blasie JK, Roder H, Saven JG, DeGrado WF. De novo design of a single-chain diphenylporphyrin metalloprotein. J Am Chem Soc. 2007 Sep 05;129(35):10732-40.
Taylor JC, Markham GD. Conformational dynamics of the active site loop of S-adenosylmethionine synthetase illuminated by site-directed spin labeling. Archives of biochemistry and biophysics. 2003 Jul 15;415(2):164-71.
Capaldi AP, Shastry MC, Kleanthous C, Roder H, Radford SE. Ultrarapid mixing experiments reveal that Im7 folds via an on-pathway intermediate. Nat Struct Biol. 2001 Jan;8(1):68-72.
Crasto CJ, Feng J. Sequence codes for extended conformation: a neighbor-dependent sequence analysis of loops in proteins. Proteins. 2001 Feb 15;42(3):399-413.
Fischer D, Elofsson A, Rychlewski L, Pazos F, Valencia A, Rost B, Ortiz AR, Dunbrack RL. CAFASP2: the second critical assessment of fully automated structure prediction methods. Proteins. 2001 Jan;Suppl 5:171-83.
Kuwata K, Shastry R, Cheng H, Hoshino M, Batt CA, Goto Y, Roder H. Structural and kinetic characterization of early folding events in beta-lactoglobulin. Nat Struct Biol. 2001 Feb;8(2):151-5.
Sauder JM, Arthur JW, Dunbrack RL. Large-scale comparison of protein sequence alignment algorithms with structure alignments. Proteins. 2000 Jul;40(1):6-22.
Taylor JC, Markham GD. The bifunctional active site of S-adenosylmethionine synthetase. Roles of the basic residues. The Journal of biological chemistry. 2000 Feb 11;275(6):4060-5.
Yi J, Arthur JW, Dunbrack RL, Skalka AM. An inhibitory monoclonal antibody binds at the turn of the helix-turn-helix motif in the N-terminal domain of HIV-1 integrase. The Journal of biological chemistry. 2000 Dec 08;275(49):38739-48.
Park SH, Shastry MC, Roder H. Folding dynamics of the B1 domain of protein G explored by ultrarapid mixing. Nat Struct Biol. 1999 Oct;6(10):943-7.
Zhang YZ, Gould KL, Dunbrack RJ, Cheng H, Roder H, Golemis EA. The evolutionarily conserved Dim1 protein defines a novel branch of the thioredoxin fold superfamily. Physiol Genomics. 1999 Nov 11;1(3):109-18.
Park SH, O'Neil KT, Roder H. An early intermediate in the folding reaction of the B1 domain of protein G contains a native-like core. Biochemistry. 1997 Nov 25;36(47):14277-83.
The above publications are sorted by year, faculty last name, and first author. Click on any highlighted author listed to find all publications attributed to that individual. Click on the publication title to see the abstract. First authors who are faculty are highlighted like this. Last authors who are faculty are highlighted like this. Other authors who are faculty are highlighted like this.

MeSH cloud from publications including the MeSH term Secondary Protein Structure

Secondary Protein Structure chemistry Non-US Gov't Support Molecular Models Kinetics US Gov't Support-PHS metabolism Protein Folding Thermodynamics Protein Conformation Amino Acid Sequence methods Proteins Tertiary Protein Structure Protein Denaturation Molecular Sequence Data genetics Chemical Models Protein Binding Protein Renaturation Binding Sites Tryptophan Computational Biology Magnetic Resonance Spectroscopy Protein Databases Site-Directed Mutagenesis Recombinant Proteins Dimerization Sequence Alignment Hydrogen-Ion Concentration Statistical Models Circular Dichroism enzymology Protein Structural Homology Mutation Algorithms Guanidine statistics & numerical data Software Fluorescence Spectrometry Biomolecular Nuclear Magnetic Resonance chemical synthesis immunology Bacterial Proteins Amino Acid Sequence Homology Solvents Factual Databases Enzyme Activation Recombinant DNA Mitogen-Activated Protein Kinase 14 Internet Apoptosis Regulatory Proteins Prions Potts model Metalloproteins conformational preference Cattle Hydrogen Bonding homology modeling Recombinant Fusion Proteins Casp Peptide Fragments NF-kappa B Amino Acid Motifs Caspase 1 Alpha-helix HIV-1 Mass Spectrometry-Matrix-Assisted Laser Desorption-Ionization Conserved Sequence Agnoprotein Catalytic Domain X-Ray Crystallography Schizosaccharomyces Antibody Binding Sites Spin Labels Methionine Adenosyltransferase Molecular Evolution Carrier Proteins G2 Phase Protein Aggregates Drosophila melanogaster growth & development S-Adenosylmethionine Enzyme-Linked Immunosorbent Assay Progressive multifocal leukoencephalopathy drug effects Ultracentrifugation Immunoglobulin G Markov Chains Cell Cycle Proteins Genetic Transformation Multiprotein Complexes Human Protein Domains Ligands Nmr US Gov't Support-Non-PHS Automation Protons JC Virus Ultraviolet Spectrophotometry Peptide Mapping Protein Kinase Inhibitors Crystallization inhibitor specificity Peptides Transfection Archaea Fluorescence Cell Cycle Bacteria Motion Protein Sequence Analysis Cysteine Hela Cells co-evolution Bacterial Antigens physiology Oligomer Polyomavirus Cytoskeletal Proteins Fluorescence Microscopy pharmacology Fungal Proteins Intrinsically unstructured Sequence Homology protein structure prediction Amino Acid Substitution Apoptotic Protease-Activating Factor 1 Porphyrins Replication Hydrogen Urea antagonists & inhibitors Viral Regulatory and Accessory Proteins HIV Integrase Mice Electron Spin Resonance Spectroscopy Dna Polyphosphates structural biology Viruses Caspase 9 template-based modeling Jcv Plasmids Time Factors Bkv Computer Simulation Gel Chromatography
Last updated on Wednesday, February 05, 2020